Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SLC6A12P48065 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SLC6A12P48065 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SLC6A12P48065 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.22■□□□□ 0.19
SLC6A12P48065 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A12P48065 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SLC6A12P48065 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A12P48065 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.21■□□□□ 0.19
SLC6A12P48065 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A12P48065 VN2R19P-201ENST00000442399 1052 ntBASIC16.21■□□□□ 0.19
SLC6A12P48065 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A12P48065 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.21■□□□□ 0.19
SLC6A12P48065 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A12P48065 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.21■□□□□ 0.19
SLC6A12P48065 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.21■□□□□ 0.19
SLC6A12P48065 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.21■□□□□ 0.19
SLC6A12P48065 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SLC6A12P48065 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SLC6A12P48065 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC6A12P48065 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.21■□□□□ 0.18
SLC6A12P48065 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC6A12P48065 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC6A12P48065 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.21■□□□□ 0.18
SLC6A12P48065 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SLC6A12P48065 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 AC012569.1-201ENST00000591191 1524 ntBASIC16.2■□□□□ 0.18
SLC6A12P48065 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
SLC6A12P48065 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SLC6A12P48065 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC6A12P48065 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC6A12P48065 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC6A12P48065 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC6A12P48065 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC6A12P48065 MIR4515-201ENST00000584082 81 ntBASIC16.2■□□□□ 0.18
SLC6A12P48065 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC6A12P48065 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC6A12P48065 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC6A12P48065 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC6A12P48065 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC6A12P48065 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC6A12P48065 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC6A12P48065 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC6A12P48065 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms