Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT2P35908 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT2P35908 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT2P35908 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KRT2P35908 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 FAM185BP-201ENST00000443595 716 ntBASIC19.3■□□□□ 0.68
KRT2P35908 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT2P35908 CXCL1P1-201ENST00000502804 216 ntBASIC19.3■□□□□ 0.68
KRT2P35908 AC087641.1-201ENST00000557561 1021 ntBASIC19.3■□□□□ 0.68
KRT2P35908 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.3■□□□□ 0.68
KRT2P35908 CYP2A7P1-201ENST00000595391 815 ntBASIC19.3■□□□□ 0.68
KRT2P35908 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
KRT2P35908 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
KRT2P35908 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.3■□□□□ 0.68
KRT2P35908 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT2P35908 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT2P35908 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KRT2P35908 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT2P35908 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KRT2P35908 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT2P35908 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 IL9RP2-201ENST00000423948 1312 ntBASIC19.29■□□□□ 0.68
KRT2P35908 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT2P35908 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT2P35908 AC104109.2-201ENST00000602919 1418 ntBASIC19.29■□□□□ 0.68
KRT2P35908 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT2P35908 IGLL3P-201ENST00000412472 434 ntBASIC19.29■□□□□ 0.68
KRT2P35908 HCG4-201ENST00000418983 998 ntBASIC19.29■□□□□ 0.68
KRT2P35908 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
KRT2P35908 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT2P35908 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 AC145285.3-201ENST00000564603 959 ntBASIC19.29■□□□□ 0.68
KRT2P35908 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT2P35908 AP001350.2-201ENST00000625104 1094 ntBASIC19.29■□□□□ 0.68
KRT2P35908 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.29■□□□□ 0.68
KRT2P35908 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT2P35908 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.29■□□□□ 0.68
KRT2P35908 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT2P35908 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT2P35908 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT2P35908 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT2P35908 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.28■□□□□ 0.68
KRT2P35908 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.28■□□□□ 0.68
KRT2P35908 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT2P35908 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.28■□□□□ 0.68
KRT2P35908 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT2P35908 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT2P35908 AL671710.1-201ENST00000610245 2349 ntBASIC19.28■□□□□ 0.68
KRT2P35908 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT2P35908 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT2P35908 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT2P35908 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT2P35908 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT2P35908 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT2P35908 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT2P35908 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
KRT2P35908 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
KRT2P35908 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT2P35908 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
KRT2P35908 AL590627.1-203ENST00000421194 1026 ntBASIC19.27■□□□□ 0.68
KRT2P35908 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.27■□□□□ 0.68
KRT2P35908 HCG4B-203ENST00000450128 991 ntBASIC19.27■□□□□ 0.68
KRT2P35908 RPL13AP23-201ENST00000480739 586 ntBASIC19.27■□□□□ 0.68
KRT2P35908 AC034105.1-201ENST00000563488 319 ntBASIC19.27■□□□□ 0.68
KRT2P35908 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT2P35908 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.27■□□□□ 0.68
KRT2P35908 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.27■□□□□ 0.68
KRT2P35908 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
KRT2P35908 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
KRT2P35908 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms