Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3BP20337 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 AC009336.1-201ENST00000608941 1553 ntBASIC14.82□□□□□ -0.04
RAB3BP20337 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3BP20337 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 TSPY20P-201ENST00000450910 630 ntBASIC14.82□□□□□ -0.04
RAB3BP20337 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
RAB3BP20337 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3BP20337 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3BP20337 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.82□□□□□ -0.04
RAB3BP20337 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RAB3BP20337 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.82□□□□□ -0.04
RAB3BP20337 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RAB3BP20337 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RAB3BP20337 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RAB3BP20337 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 DBET-201ENST00000630918 3363 ntBASIC14.81□□□□□ -0.04
RAB3BP20337 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB3BP20337 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB3BP20337 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB3BP20337 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.81□□□□□ -0.04
RAB3BP20337 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 AL596087.1-201ENST00000400979 1969 ntBASIC14.81□□□□□ -0.04
RAB3BP20337 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 AC126177.1-201ENST00000547829 2218 ntBASIC14.81□□□□□ -0.04
RAB3BP20337 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.81□□□□□ -0.04
RAB3BP20337 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RAB3BP20337 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.81□□□□□ -0.04
RAB3BP20337 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.8□□□□□ -0.04
RAB3BP20337 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3BP20337 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB3BP20337 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3BP20337 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
RAB3BP20337 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RAB3BP20337 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3BP20337 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3BP20337 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3BP20337 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.8□□□□□ -0.04
RAB3BP20337 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3BP20337 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAB3BP20337 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3BP20337 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3BP20337 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RAB3BP20337 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.8□□□□□ -0.04
RAB3BP20337 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RAB3BP20337 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RAB3BP20337 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms