Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.78□□□□□ -0.2
DEFA4P12838 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.78□□□□□ -0.2
DEFA4P12838 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
DEFA4P12838 AC006449.5-201ENST00000610658 2098 ntBASIC13.78□□□□□ -0.2
DEFA4P12838 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.78□□□□□ -0.2
DEFA4P12838 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
DEFA4P12838 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
DEFA4P12838 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DEFA4P12838 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DEFA4P12838 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
DEFA4P12838 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DEFA4P12838 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DEFA4P12838 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DEFA4P12838 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
DEFA4P12838 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.77□□□□□ -0.21
DEFA4P12838 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.77□□□□□ -0.21
DEFA4P12838 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
DEFA4P12838 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
DEFA4P12838 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.77□□□□□ -0.21
DEFA4P12838 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
DEFA4P12838 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
DEFA4P12838 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.77□□□□□ -0.21
DEFA4P12838 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
DEFA4P12838 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.77□□□□□ -0.21
DEFA4P12838 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.77□□□□□ -0.21
DEFA4P12838 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.77□□□□□ -0.21
DEFA4P12838 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.77□□□□□ -0.21
DEFA4P12838 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.77□□□□□ -0.21
DEFA4P12838 AC005336.2-201ENST00000593183 939 ntBASIC13.77□□□□□ -0.21
DEFA4P12838 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.77□□□□□ -0.21
DEFA4P12838 AL353801.3-201ENST00000609898 542 ntBASIC13.77□□□□□ -0.21
DEFA4P12838 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
DEFA4P12838 AC116407.4-201ENST00000623319 1061 ntBASIC13.77□□□□□ -0.21
DEFA4P12838 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.77□□□□□ -0.21
DEFA4P12838 AC092364.2-201ENST00000596710 2692 ntBASIC13.77□□□□□ -0.21
DEFA4P12838 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
DEFA4P12838 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DEFA4P12838 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DEFA4P12838 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.76□□□□□ -0.21
DEFA4P12838 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DEFA4P12838 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
DEFA4P12838 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DEFA4P12838 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
DEFA4P12838 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.76□□□□□ -0.21
DEFA4P12838 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.76□□□□□ -0.21
DEFA4P12838 LINC00265-3P-201ENST00000447588 903 ntBASIC13.76□□□□□ -0.21
DEFA4P12838 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.76□□□□□ -0.21
DEFA4P12838 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.76□□□□□ -0.21
DEFA4P12838 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.76□□□□□ -0.21
DEFA4P12838 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.76□□□□□ -0.21
DEFA4P12838 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.76□□□□□ -0.21
DEFA4P12838 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.76□□□□□ -0.21
DEFA4P12838 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
DEFA4P12838 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
DEFA4P12838 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
DEFA4P12838 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
DEFA4P12838 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms