Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.17□□□□□ -0.3
CD28P10747 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.17□□□□□ -0.3
CD28P10747 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.17□□□□□ -0.3
CD28P10747 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.17□□□□□ -0.3
CD28P10747 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CD28P10747 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
CD28P10747 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.16□□□□□ -0.3
CD28P10747 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 AC008764.6-201ENST00000595909 2069 ntBASIC13.16□□□□□ -0.3
CD28P10747 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CD28P10747 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.16□□□□□ -0.3
CD28P10747 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.16□□□□□ -0.3
CD28P10747 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CD28P10747 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
CD28P10747 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.16□□□□□ -0.3
CD28P10747 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.16□□□□□ -0.3
CD28P10747 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.16□□□□□ -0.3
CD28P10747 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.16□□□□□ -0.3
CD28P10747 DUX4L17-201ENST00000557360 1267 ntBASIC13.16□□□□□ -0.3
CD28P10747 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 AL135744.1-201ENST00000565098 629 ntBASIC13.16□□□□□ -0.3
CD28P10747 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 MIR3197-201ENST00000582241 73 ntBASIC13.16□□□□□ -0.3
CD28P10747 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.16□□□□□ -0.3
CD28P10747 AC092364.2-202ENST00000597012 1073 ntBASIC13.16□□□□□ -0.3
CD28P10747 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CD28P10747 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CD28P10747 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.16□□□□□ -0.3
CD28P10747 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.16□□□□□ -0.3
CD28P10747 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.16□□□□□ -0.3
CD28P10747 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CD28P10747 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.15□□□□□ -0.3
CD28P10747 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.15□□□□□ -0.3
CD28P10747 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.15□□□□□ -0.3
CD28P10747 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CD28P10747 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CD28P10747 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.15□□□□□ -0.3
CD28P10747 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CD28P10747 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CD28P10747 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.15□□□□□ -0.3
CD28P10747 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.15□□□□□ -0.3
CD28P10747 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.15□□□□□ -0.3
CD28P10747 FAM8A3P-201ENST00000427218 844 ntBASIC13.15□□□□□ -0.3
CD28P10747 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CD28P10747 FAM86GP-201ENST00000448322 971 ntBASIC13.15□□□□□ -0.3
CD28P10747 RN7SL589P-201ENST00000481268 310 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms