Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.37■□□□□ 0.21
LINGO3P0C6S8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 KRT8P26-201ENST00000534154 1276 ntBASIC16.36■□□□□ 0.21
LINGO3P0C6S8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINGO3P0C6S8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 AC091076.1-201ENST00000610741 619 ntBASIC16.35■□□□□ 0.21
LINGO3P0C6S8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 AC022532.1-201ENST00000624563 1728 ntBASIC16.35■□□□□ 0.21
LINGO3P0C6S8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 AC026748.1-201ENST00000624349 3251 ntBASIC16.35■□□□□ 0.21
LINGO3P0C6S8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
LINGO3P0C6S8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LINGO3P0C6S8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms