Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.16□□□□□ -0.14
GAPDHP04406 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.16□□□□□ -0.14
GAPDHP04406 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.16□□□□□ -0.14
GAPDHP04406 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.16□□□□□ -0.14
GAPDHP04406 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.16□□□□□ -0.14
GAPDHP04406 AC073592.5-201ENST00000624854 528 ntBASIC14.16□□□□□ -0.14
GAPDHP04406 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
GAPDHP04406 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.16□□□□□ -0.14
GAPDHP04406 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GAPDHP04406 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
GAPDHP04406 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GAPDHP04406 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 KLF4P1-201ENST00000412782 1185 ntBASIC14.15□□□□□ -0.14
GAPDHP04406 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 ABCD1P5-201ENST00000445663 754 ntBASIC14.15□□□□□ -0.14
GAPDHP04406 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.15□□□□□ -0.14
GAPDHP04406 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.15□□□□□ -0.14
GAPDHP04406 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.15□□□□□ -0.14
GAPDHP04406 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GAPDHP04406 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
GAPDHP04406 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GAPDHP04406 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GAPDHP04406 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GAPDHP04406 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
GAPDHP04406 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
GAPDHP04406 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.14□□□□□ -0.15
GAPDHP04406 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 TSPY26P-202ENST00000565928 3884 ntBASIC14.14□□□□□ -0.15
GAPDHP04406 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
GAPDHP04406 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.14□□□□□ -0.15
GAPDHP04406 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GAPDHP04406 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.14□□□□□ -0.15
GAPDHP04406 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms