Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AC002558.1-201ENST00000488906 803 ntBASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AC008550.1-201ENST00000511500 884 ntBASIC12.72□□□□□ -0.37
HLA-DQA1P01909 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 MIR6786-201ENST00000616843 113 ntBASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AC130371.2-201ENST00000619443 611 ntBASIC12.72□□□□□ -0.37
HLA-DQA1P01909 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AL049637.2-201ENST00000641778 930 ntBASIC12.72□□□□□ -0.37
HLA-DQA1P01909 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 AC023157.3-201ENST00000619086 2088 ntBASIC12.72□□□□□ -0.37
HLA-DQA1P01909 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQA1P01909 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 KRT18P65-201ENST00000439811 1286 ntBASIC12.71□□□□□ -0.37
HLA-DQA1P01909 AC008040.2-201ENST00000461049 708 ntBASIC12.71□□□□□ -0.37
HLA-DQA1P01909 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DQA1P01909 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms