Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.51■□□□□ 0.23
PEX1O43933 EMBP1-201ENST00000458200 901 ntBASIC16.51■□□□□ 0.23
PEX1O43933 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.51■□□□□ 0.23
PEX1O43933 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.51■□□□□ 0.23
PEX1O43933 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.51■□□□□ 0.23
PEX1O43933 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.51■□□□□ 0.23
PEX1O43933 AL353801.3-201ENST00000609898 542 ntBASIC16.51■□□□□ 0.23
PEX1O43933 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PEX1O43933 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PEX1O43933 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PEX1O43933 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.51■□□□□ 0.23
PEX1O43933 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PEX1O43933 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PEX1O43933 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PEX1O43933 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.51■□□□□ 0.23
PEX1O43933 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.51■□□□□ 0.23
PEX1O43933 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PEX1O43933 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PEX1O43933 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.51■□□□□ 0.23
PEX1O43933 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PEX1O43933 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.5■□□□□ 0.23
PEX1O43933 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.5■□□□□ 0.23
PEX1O43933 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.5■□□□□ 0.23
PEX1O43933 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PEX1O43933 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 NUS1P2-201ENST00000417358 873 ntBASIC16.5■□□□□ 0.23
PEX1O43933 KRT16P4-201ENST00000453883 522 ntBASIC16.5■□□□□ 0.23
PEX1O43933 AC068472.1-201ENST00000474589 881 ntBASIC16.5■□□□□ 0.23
PEX1O43933 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.5■□□□□ 0.23
PEX1O43933 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.5■□□□□ 0.23
PEX1O43933 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.5■□□□□ 0.23
PEX1O43933 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PEX1O43933 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PEX1O43933 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PEX1O43933 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
PEX1O43933 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PEX1O43933 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.49■□□□□ 0.23
PEX1O43933 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 AC092384.3-202ENST00000564646 2873 ntBASIC16.49■□□□□ 0.23
PEX1O43933 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 AC099063.4-201ENST00000641099 1602 ntBASIC16.49■□□□□ 0.23
PEX1O43933 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PEX1O43933 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PEX1O43933 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.49■□□□□ 0.23
PEX1O43933 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
PEX1O43933 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.49■□□□□ 0.23
PEX1O43933 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.49■□□□□ 0.23
PEX1O43933 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
PEX1O43933 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.49■□□□□ 0.23
PEX1O43933 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.49■□□□□ 0.23
PEX1O43933 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.49■□□□□ 0.23
PEX1O43933 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.49■□□□□ 0.23
PEX1O43933 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.49■□□□□ 0.23
PEX1O43933 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 AC009154.2-201ENST00000621177 724 ntBASIC16.49■□□□□ 0.23
PEX1O43933 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PEX1O43933 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.49■□□□□ 0.23
PEX1O43933 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PEX1O43933 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.49■□□□□ 0.23
PEX1O43933 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PEX1O43933 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PEX1O43933 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.48■□□□□ 0.23
PEX1O43933 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.48■□□□□ 0.23
PEX1O43933 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PEX1O43933 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PEX1O43933 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms