Protein–RNA interactions for Protein: O15068

MCF2L, Guanine nucleotide exchange factor DBS, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2LO15068 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MCF2LO15068 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MCF2LO15068 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MCF2LO15068 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.66■□□□□ 0.42
MCF2LO15068 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.66■□□□□ 0.42
MCF2LO15068 UBALD1-205ENST00000590891 2641 ntBASIC17.66■□□□□ 0.42
MCF2LO15068 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
MCF2LO15068 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.65■□□□□ 0.42
MCF2LO15068 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.65■□□□□ 0.42
MCF2LO15068 AP002490.2-201ENST00000524791 560 ntBASIC17.65■□□□□ 0.42
MCF2LO15068 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.65■□□□□ 0.42
MCF2LO15068 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.65■□□□□ 0.42
MCF2LO15068 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.65■□□□□ 0.42
MCF2LO15068 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.65■□□□□ 0.42
MCF2LO15068 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MCF2LO15068 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
MCF2LO15068 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MCF2LO15068 NCF1C-201ENST00000438382 1427 ntBASIC17.64■□□□□ 0.42
MCF2LO15068 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.64■□□□□ 0.41
MCF2LO15068 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.64■□□□□ 0.41
MCF2LO15068 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.64■□□□□ 0.41
MCF2LO15068 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MCF2LO15068 TNRC18P3-201ENST00000441896 2691 ntBASIC17.64■□□□□ 0.41
MCF2LO15068 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.64■□□□□ 0.41
MCF2LO15068 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.64■□□□□ 0.41
MCF2LO15068 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
MCF2LO15068 AC073621.1-201ENST00000392730 636 ntBASIC17.64■□□□□ 0.41
MCF2LO15068 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.64■□□□□ 0.41
MCF2LO15068 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.64■□□□□ 0.41
MCF2LO15068 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.64■□□□□ 0.41
MCF2LO15068 KRT18P58-201ENST00000527480 1120 ntBASIC17.64■□□□□ 0.41
MCF2LO15068 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.64■□□□□ 0.41
MCF2LO15068 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.64■□□□□ 0.41
MCF2LO15068 AL356488.2-201ENST00000602755 427 ntBASIC17.64■□□□□ 0.41
MCF2LO15068 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MCF2LO15068 AC004706.3-202ENST00000621574 984 ntBASIC17.64■□□□□ 0.41
MCF2LO15068 PGM5P2-202ENST00000637225 1043 ntBASIC17.64■□□□□ 0.41
MCF2LO15068 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.64■□□□□ 0.41
MCF2LO15068 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.64■□□□□ 0.41
MCF2LO15068 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.64■□□□□ 0.41
MCF2LO15068 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.64■□□□□ 0.41
MCF2LO15068 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
MCF2LO15068 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MCF2LO15068 AL139384.1-201ENST00000612143 3047 ntBASIC17.64■□□□□ 0.41
MCF2LO15068 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.63■□□□□ 0.41
MCF2LO15068 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
MCF2LO15068 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MCF2LO15068 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
MCF2LO15068 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MCF2LO15068 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MCF2LO15068 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.63■□□□□ 0.41
MCF2LO15068 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms