Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.99■□□□□ 0.15
UPK1AO00322 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
UPK1AO00322 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.99■□□□□ 0.15
UPK1AO00322 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.99■□□□□ 0.15
UPK1AO00322 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
UPK1AO00322 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UPK1AO00322 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.98■□□□□ 0.15
UPK1AO00322 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
UPK1AO00322 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
UPK1AO00322 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
UPK1AO00322 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
UPK1AO00322 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
UPK1AO00322 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.98■□□□□ 0.15
UPK1AO00322 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.98■□□□□ 0.15
UPK1AO00322 MST1L-201ENST00000442552 2185 ntBASIC15.98■□□□□ 0.15
UPK1AO00322 EMBP1-201ENST00000458200 901 ntBASIC15.98■□□□□ 0.15
UPK1AO00322 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.98■□□□□ 0.15
UPK1AO00322 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.98■□□□□ 0.15
UPK1AO00322 AC139887.3-201ENST00000568585 713 ntBASIC15.98■□□□□ 0.15
UPK1AO00322 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.98■□□□□ 0.15
UPK1AO00322 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.98■□□□□ 0.15
UPK1AO00322 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
UPK1AO00322 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UPK1AO00322 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
UPK1AO00322 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.97■□□□□ 0.15
UPK1AO00322 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 AL391256.1-201ENST00000443260 1855 ntBASIC15.97■□□□□ 0.15
UPK1AO00322 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
UPK1AO00322 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
UPK1AO00322 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
UPK1AO00322 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 AP002414.1-201ENST00000391405 1147 ntBASIC15.97■□□□□ 0.15
UPK1AO00322 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.97■□□□□ 0.15
UPK1AO00322 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.97■□□□□ 0.15
UPK1AO00322 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.97■□□□□ 0.15
UPK1AO00322 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.97■□□□□ 0.15
UPK1AO00322 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
UPK1AO00322 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.97■□□□□ 0.15
UPK1AO00322 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 AC004706.3-202ENST00000621574 984 ntBASIC15.97■□□□□ 0.15
UPK1AO00322 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
UPK1AO00322 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
UPK1AO00322 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.97■□□□□ 0.15
UPK1AO00322 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.96■□□□□ 0.15
UPK1AO00322 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms