Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4S1Q9Y587 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
AP4S1Q9Y587 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4S1Q9Y587 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
AP4S1Q9Y587 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4S1Q9Y587 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP4S1Q9Y587 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16■□□□□ 0.15
AP4S1Q9Y587 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP4S1Q9Y587 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16■□□□□ 0.15
AP4S1Q9Y587 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16■□□□□ 0.15
AP4S1Q9Y587 AC022532.1-201ENST00000624563 1728 ntBASIC15.99■□□□□ 0.15
AP4S1Q9Y587 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
AP4S1Q9Y587 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 LINC02228-204ENST00000642115 2962 ntBASIC15.98■□□□□ 0.15
AP4S1Q9Y587 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 AC111152.3-201ENST00000569699 673 ntBASIC15.98■□□□□ 0.15
AP4S1Q9Y587 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 AL136038.4-201ENST00000603606 1261 ntBASIC15.98■□□□□ 0.15
AP4S1Q9Y587 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 AC079602.3-201ENST00000623931 403 ntBASIC15.98■□□□□ 0.15
AP4S1Q9Y587 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms