Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC00474Q9P2X8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 AC093909.1-201ENST00000504731 1122 ntBASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 AL121912.1-201ENST00000603683 238 ntBASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC00474Q9P2X8 UBALD1-205ENST00000590891 2641 ntBASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 AD000864.1-201ENST00000624076 2295 ntBASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 AC005052.1-201ENST00000625181 2492 ntBASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 LAGE3P1-201ENST00000425356 484 ntBASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 AL662844.1-201ENST00000546340 181 ntBASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LINC00474Q9P2X8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms