Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 AL355306.1-201ENST00000415580 579 ntBASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 AC027612.4-201ENST00000605371 583 ntBASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 AC105020.1-201ENST00000435356 2205 ntBASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HMG20BQ9P0W2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 AC004461.1-201ENST00000412461 403 ntBASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 AL009183.1-201ENST00000603760 355 ntBASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
HMG20BQ9P0W2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
HMG20BQ9P0W2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
HMG20BQ9P0W2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 AL671277.1-201ENST00000429656 993 ntBASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 AC087641.1-201ENST00000557561 1021 ntBASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 AC022145.2-201ENST00000598203 171 ntBASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMG20BQ9P0W2 NKILA-202ENST00000614771 2598 ntBASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 AC005915.1-201ENST00000624912 2018 ntBASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 RNU1-129P-201ENST00000384064 167 ntBASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 AP000344.2-201ENST00000512987 629 ntBASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 KRT8P48-201ENST00000515599 1220 ntBASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 U1.21-201ENST00000580816 167 ntBASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMG20BQ9P0W2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms