Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BLOC1S4Q9NUP1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 AL513480.1-201ENST00000451731 511 ntBASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 AC018845.2-201ENST00000568326 409 ntBASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BLOC1S4Q9NUP1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 GGT3P-204ENST00000453783 1664 ntBASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 AC005052.1-201ENST00000625181 2492 ntBASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BLOC1S4Q9NUP1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.67■□□□□ 0.58
BLOC1S4Q9NUP1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms