Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 AC009533.2-201ENST00000543664 586 ntBASIC18.86■□□□□ 0.61
CBX8Q9HC52 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 IGHV3-41-201ENST00000613121 348 ntBASIC18.86■□□□□ 0.61
CBX8Q9HC52 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.86■□□□□ 0.61
CBX8Q9HC52 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CBX8Q9HC52 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 KRT8P49-201ENST00000604166 1432 ntBASIC18.85■□□□□ 0.61
CBX8Q9HC52 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 AC013467.2-201ENST00000605472 835 ntBASIC18.85■□□□□ 0.61
CBX8Q9HC52 AL139011.1-202ENST00000642063 584 ntBASIC18.85■□□□□ 0.61
CBX8Q9HC52 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CBX8Q9HC52 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CBX8Q9HC52 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 AC068418.2-201ENST00000577309 3703 ntBASIC18.84■□□□□ 0.61
CBX8Q9HC52 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 AL645929.1-201ENST00000420084 975 ntBASIC18.84■□□□□ 0.61
CBX8Q9HC52 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 AC006011.2-201ENST00000621313 1158 ntBASIC18.84■□□□□ 0.61
CBX8Q9HC52 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.84■□□□□ 0.61
CBX8Q9HC52 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CBX8Q9HC52 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms