Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC004817.3-201ENST00000602957 2129 ntBASIC14.99□□□□□ -0.01
VRK1Q99986 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.99□□□□□ -0.01
VRK1Q99986 AC133963.1-201ENST00000504166 1679 ntBASIC14.99□□□□□ -0.01
VRK1Q99986 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
VRK1Q99986 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
VRK1Q99986 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.99□□□□□ -0.01
VRK1Q99986 AC009949.1-201ENST00000623048 1830 ntBASIC14.99□□□□□ -0.01
VRK1Q99986 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
VRK1Q99986 PMPCAP1-201ENST00000508114 1576 ntBASIC14.98□□□□□ -0.01
VRK1Q99986 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
VRK1Q99986 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.98□□□□□ -0.01
VRK1Q99986 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VRK1Q99986 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.98□□□□□ -0.01
VRK1Q99986 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.98□□□□□ -0.01
VRK1Q99986 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.98□□□□□ -0.01
VRK1Q99986 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
VRK1Q99986 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.98□□□□□ -0.01
VRK1Q99986 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.98□□□□□ -0.01
VRK1Q99986 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 AC025062.2-201ENST00000605477 670 ntBASIC14.98□□□□□ -0.01
VRK1Q99986 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
VRK1Q99986 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.98□□□□□ -0.01
VRK1Q99986 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 AC079776.2-201ENST00000641154 1609 ntBASIC14.98□□□□□ -0.01
VRK1Q99986 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 LINC02199-201ENST00000506655 2702 ntBASIC14.98□□□□□ -0.01
VRK1Q99986 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.98□□□□□ -0.01
VRK1Q99986 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
VRK1Q99986 AGGF1P2-201ENST00000426656 2106 ntBASIC14.98□□□□□ -0.01
VRK1Q99986 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.98□□□□□ -0.01
VRK1Q99986 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
VRK1Q99986 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
VRK1Q99986 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
VRK1Q99986 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.97□□□□□ -0.01
VRK1Q99986 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VRK1Q99986 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VRK1Q99986 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.97□□□□□ -0.01
VRK1Q99986 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 AD001527.2-201ENST00000622994 785 ntBASIC14.97□□□□□ -0.01
VRK1Q99986 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.97□□□□□ -0.01
VRK1Q99986 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 AL022326.1-202ENST00000641533 845 ntBASIC14.97□□□□□ -0.01
VRK1Q99986 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
VRK1Q99986 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.97□□□□□ -0.01
VRK1Q99986 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.97□□□□□ -0.01
VRK1Q99986 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
VRK1Q99986 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 BX276092.7-203ENST00000637198 1536 ntBASIC14.97□□□□□ -0.01
VRK1Q99986 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
VRK1Q99986 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VRK1Q99986 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.96□□□□□ -0.01
VRK1Q99986 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
VRK1Q99986 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VRK1Q99986 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
VRK1Q99986 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
VRK1Q99986 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
VRK1Q99986 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms