Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDH19Q8TAB3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 HLA-J-202ENST00000469281 1241 ntBASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 OR7E47P-204ENST00000575924 449 ntBASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 AC005593.1-201ENST00000624894 515 ntBASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 PGM5P2-202ENST00000637225 1043 ntBASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDH19Q8TAB3 AL671710.1-201ENST00000610245 2349 ntBASIC17.39■□□□□ 0.38
PCDH19Q8TAB3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDH19Q8TAB3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.39■□□□□ 0.38
PCDH19Q8TAB3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 AC108073.2-201ENST00000464002 357 ntBASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 AC091167.2-201ENST00000579581 588 ntBASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 AC004790.2-201ENST00000623588 572 ntBASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 ALOX12P2-203ENST00000570921 1945 ntBASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
PCDH19Q8TAB3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 AC131009.4-201ENST00000624048 1740 ntBASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 AC092910.1-201ENST00000482027 1129 ntBASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 AC129492.6-201ENST00000611383 1305 ntBASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDH19Q8TAB3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDH19Q8TAB3 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms