Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK4Q8NE63 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.46■□□□□ 0.23
HIPK4Q8NE63 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIPK4Q8NE63 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIPK4Q8NE63 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
HIPK4Q8NE63 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HIPK4Q8NE63 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIPK4Q8NE63 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HIPK4Q8NE63 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 AP003733.1-201ENST00000491725 852 ntBASIC16.45■□□□□ 0.22
HIPK4Q8NE63 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.45■□□□□ 0.22
HIPK4Q8NE63 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 HLA-A-202ENST00000376806 1854 ntBASIC16.44■□□□□ 0.22
HIPK4Q8NE63 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.44■□□□□ 0.22
HIPK4Q8NE63 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 MTCL1P1-201ENST00000446207 792 ntBASIC16.44■□□□□ 0.22
HIPK4Q8NE63 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 ZNF444P1-201ENST00000559497 298 ntBASIC16.44■□□□□ 0.22
HIPK4Q8NE63 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
HIPK4Q8NE63 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 AL353692.3-201ENST00000407031 1396 ntBASIC16.43■□□□□ 0.22
HIPK4Q8NE63 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK4Q8NE63 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms