Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 AP000550.4-202ENST00000639755 178 ntBASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 AL603756.1-201ENST00000606511 2163 ntBASIC17.89■□□□□ 0.45
CCDC50Q8IVM0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 NUS1P2-201ENST00000417358 873 ntBASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 AC099336.1-202ENST00000602961 463 ntBASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC50Q8IVM0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 PCDHB17P-201ENST00000539533 2393 ntBASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 LINC00554-201ENST00000564841 3011 ntBASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 AC008741.2-201ENST00000612792 3115 ntBASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC50Q8IVM0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 LINC02199-201ENST00000506655 2702 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 AC005052.1-201ENST00000625181 2492 ntBASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC50Q8IVM0 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms