Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAI1Q7Z5J4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 AC073389.1-201ENST00000595595 795 ntBASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 AC106820.2-201ENST00000563775 3264 ntBASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RAI1Q7Z5J4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAI1Q7Z5J4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 FAM220BP-201ENST00000377689 816 ntBASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 AC241585.1-201ENST00000433527 519 ntBASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 BANF1P1-201ENST00000553684 263 ntBASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 SPDYE22P-201ENST00000582158 798 ntBASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 MIR4453-201ENST00000584019 89 ntBASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 CYP2A7P1-201ENST00000595391 815 ntBASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAI1Q7Z5J4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms