Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.4■□□□□ 0.7
OTOP1Q7RTM1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
OTOP1Q7RTM1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
OTOP1Q7RTM1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
OTOP1Q7RTM1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
OTOP1Q7RTM1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
OTOP1Q7RTM1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
OTOP1Q7RTM1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
OTOP1Q7RTM1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 AC141586.5-201ENST00000624546 2050 ntBASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 AL138828.2-201ENST00000615812 383 ntBASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 WASH6P-202ENST00000359512 1437 ntBASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OTOP1Q7RTM1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 AC092658.1-201ENST00000505836 891 ntBASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 AC093525.9-201ENST00000624961 1746 ntBASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
OTOP1Q7RTM1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 MIR658-201ENST00000385210 100 ntBASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 AL353779.1-201ENST00000434793 351 ntBASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.37■□□□□ 0.69
OTOP1Q7RTM1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms