Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
LCN1P1Q5VSP4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LCN1P1Q5VSP4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LCN1P1Q5VSP4 AC023824.1-201ENST00000562945 2975 ntBASIC15.33■□□□□ 0.05
LCN1P1Q5VSP4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LCN1P1Q5VSP4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LCN1P1Q5VSP4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LCN1P1Q5VSP4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LCN1P1Q5VSP4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 AC009533.2-201ENST00000543664 586 ntBASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 LINC01238-205ENST00000567549 1107 ntBASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 AC006011.2-201ENST00000621313 1158 ntBASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
LCN1P1Q5VSP4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 AC246785.2-201ENST00000432512 513 ntBASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 SPDYE13P-201ENST00000445314 798 ntBASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 AL671277.2-201ENST00000458060 996 ntBASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
LCN1P1Q5VSP4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms