Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AL031008.1-201ENST00000619963 541 ntBASIC15.73■□□□□ 0.11
RNF144AP50876 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF144AP50876 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RNF144AP50876 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 AC243591.1-201ENST00000452967 1364 ntBASIC15.73■□□□□ 0.11
RNF144AP50876 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RNF144AP50876 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF144AP50876 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF144AP50876 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.72■□□□□ 0.11
RNF144AP50876 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 FAM197Y8-203ENST00000450145 560 ntBASIC15.72■□□□□ 0.11
RNF144AP50876 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RNF144AP50876 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.72■□□□□ 0.11
RNF144AP50876 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 AL121894.2-201ENST00000602977 491 ntBASIC15.72■□□□□ 0.11
RNF144AP50876 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF144AP50876 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
RNF144AP50876 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF144AP50876 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF144AP50876 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF144AP50876 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF144AP50876 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RNF144AP50876 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF144AP50876 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF144AP50876 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
RNF144AP50876 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RNF144AP50876 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF144AP50876 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RNF144AP50876 AC017007.3-201ENST00000479865 435 ntBASIC15.71■□□□□ 0.11
RNF144AP50876 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.71■□□□□ 0.11
RNF144AP50876 RNPS1P1-201ENST00000507437 918 ntBASIC15.71■□□□□ 0.11
RNF144AP50876 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF144AP50876 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF144AP50876 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF144AP50876 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
RNF144AP50876 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF144AP50876 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF144AP50876 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.71■□□□□ 0.1
RNF144AP50876 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RNF144AP50876 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
RNF144AP50876 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF144AP50876 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RNF144AP50876 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.1
RNF144AP50876 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.1
RNF144AP50876 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RNF144AP50876 AC008741.2-201ENST00000612792 3115 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms