Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
GRIA4P48058 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIA4P48058 MIR4469-201ENST00000583919 79 ntBASIC17.28■□□□□ 0.36
GRIA4P48058 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.28■□□□□ 0.36
GRIA4P48058 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.28■□□□□ 0.36
GRIA4P48058 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIA4P48058 AC010654.1-201ENST00000615722 808 ntBASIC17.28■□□□□ 0.36
GRIA4P48058 AC092865.6-201ENST00000642101 219 ntBASIC17.28■□□□□ 0.36
GRIA4P48058 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIA4P48058 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIA4P48058 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIA4P48058 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRIA4P48058 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIA4P48058 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIA4P48058 UBALD1-205ENST00000590891 2641 ntBASIC17.28■□□□□ 0.36
GRIA4P48058 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRIA4P48058 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
GRIA4P48058 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIA4P48058 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIA4P48058 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIA4P48058 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIA4P48058 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.28■□□□□ 0.36
GRIA4P48058 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
GRIA4P48058 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.27■□□□□ 0.36
GRIA4P48058 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.27■□□□□ 0.36
GRIA4P48058 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.36
GRIA4P48058 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.27■□□□□ 0.36
GRIA4P48058 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.27■□□□□ 0.36
GRIA4P48058 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.27■□□□□ 0.36
GRIA4P48058 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.27■□□□□ 0.36
GRIA4P48058 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.27■□□□□ 0.36
GRIA4P48058 MKNK2P1-201ENST00000437526 628 ntBASIC17.27■□□□□ 0.36
GRIA4P48058 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.27■□□□□ 0.36
GRIA4P48058 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.27■□□□□ 0.36
GRIA4P48058 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.27■□□□□ 0.36
GRIA4P48058 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.27■□□□□ 0.36
GRIA4P48058 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.27■□□□□ 0.36
GRIA4P48058 SNHG9-202ENST00000564014 471 ntBASIC17.27■□□□□ 0.36
GRIA4P48058 AC018845.2-201ENST00000568326 409 ntBASIC17.27■□□□□ 0.36
GRIA4P48058 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
GRIA4P48058 AL596442.2-201ENST00000610240 980 ntBASIC17.27■□□□□ 0.36
GRIA4P48058 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.27■□□□□ 0.36
GRIA4P48058 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
GRIA4P48058 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.27■□□□□ 0.35
GRIA4P48058 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
GRIA4P48058 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRIA4P48058 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRIA4P48058 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.27■□□□□ 0.35
GRIA4P48058 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
GRIA4P48058 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
GRIA4P48058 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRIA4P48058 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.27■□□□□ 0.35
GRIA4P48058 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRIA4P48058 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.27■□□□□ 0.35
GRIA4P48058 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
GRIA4P48058 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.27■□□□□ 0.35
GRIA4P48058 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.26■□□□□ 0.35
GRIA4P48058 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
GRIA4P48058 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GRIA4P48058 KRT18P28-201ENST00000453838 1332 ntBASIC17.26■□□□□ 0.35
GRIA4P48058 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
GRIA4P48058 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
GRIA4P48058 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GRIA4P48058 OR6D1P-203ENST00000641209 4860 ntBASIC17.26■□□□□ 0.35
GRIA4P48058 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
GRIA4P48058 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GRIA4P48058 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
GRIA4P48058 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
GRIA4P48058 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.26■□□□□ 0.35
GRIA4P48058 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
GRIA4P48058 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
GRIA4P48058 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.26■□□□□ 0.35
GRIA4P48058 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GRIA4P48058 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.26■□□□□ 0.35
GRIA4P48058 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.26■□□□□ 0.35
GRIA4P48058 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.26■□□□□ 0.35
GRIA4P48058 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms