Protein–RNA interactions for Protein: P31483

TIA1, Nucleolysin TIA-1 isoform p40, humanhuman

Known RBP eCLIP

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIA1P31483 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.231e-6■□□□□ 9.1
TIA1P31483 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.481e-6■□□□□ 9.1
TIA1P31483 FAM178B-202ENST00000470789 722 ntTSL 1 (best)10.63□□□□□ -0.711e-6■□□□□ 9.1
TIA1P31483 SCRIB-207ENST00000531942 421 ntTSL 219.8■□□□□ 0.762e-8■□□□□ 9.1
TIA1P31483 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.412e-8■□□□□ 9.1
TIA1P31483 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.232e-8■□□□□ 9.1
TIA1P31483 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.152e-8■□□□□ 9.1
TIA1P31483 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.121e-7■□□□□ 9.1
TIA1P31483 SEC16A-209ENST00000472305 537 ntTSL 312.12□□□□□ -0.471e-7■□□□□ 9.1
TIA1P31483 SEC16A-207ENST00000453963 4834 ntAPPRIS ALT2 TSL 1 (best)11.58□□□□□ -0.561e-7■□□□□ 9.1
TIA1P31483 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.671e-7■□□□□ 9.1
TIA1P31483 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.781e-7■□□□□ 9.1
TIA1P31483 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.841e-7■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-203ENST00000501869 684 ntTSL 1 (best)16.82■□□□□ 0.283e-8■□□□□ 9.1
TIA1P31483 NUP160-207ENST00000528501 1961 ntTSL 215.81■□□□□ 0.123e-8■□□□□ 9.1
TIA1P31483 SKIV2L-204ENST00000465703 4507 ntTSL 1 (best)14.6□□□□□ -0.073e-8■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.4□□□□□ -0.13e-8■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-205ENST00000504769 548 ntTSL 414.4□□□□□ -0.13e-8■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-206ENST00000504922 585 ntTSL 214.31□□□□□ -0.123e-8■□□□□ 9.1
TIA1P31483 SKIV2L-202ENST00000461073 1157 ntTSL 214.25□□□□□ -0.133e-8■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.73□□□□□ -0.213e-8■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-210ENST00000510087 590 ntTSL 312.77□□□□□ -0.373e-8■□□□□ 9.1
TIA1P31483 SKIV2L-212ENST00000488648 720 ntTSL 511.75□□□□□ -0.533e-8■□□□□ 9.1
TIA1P31483 SKIV2L-208ENST00000474839 3378 ntTSL 211.51□□□□□ -0.573e-8■□□□□ 9.1
TIA1P31483 SKIV2L-201ENST00000375394 3894 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.733e-8■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC8.89□□□□□ -0.993e-8■□□□□ 9.1
TIA1P31483 NUP160-204ENST00000527126 527 ntTSL 28.41□□□□□ -1.063e-8■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-201ENST00000496733 409 ntTSL 37.63□□□□□ -1.193e-8■□□□□ 9.1
TIA1P31483 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.28□□□□□ -1.43e-8■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.11□□□□□ -1.593e-8■□□□□ 9.1
TIA1P31483 TMEM161B-AS1-211ENST00000512724 570 ntTSL 34.32□□□□□ -1.723e-8■□□□□ 9.1
TIA1P31483 C1GALT1-203ENST00000419721 591 ntTSL 319.47■□□□□ 0.712e-8■□□□□ 9.1
TIA1P31483 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.294e-8■□□□□ 9.1
TIA1P31483 C1GALT1-206ENST00000467716 458 ntTSL 516.35■□□□□ 0.212e-8■□□□□ 9.1
TIA1P31483 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.78■□□□□ 0.124e-8■□□□□ 9.1
TIA1P31483 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.122e-8■□□□□ 9.1
TIA1P31483 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.43□□□□□ -0.262e-8■□□□□ 9.1
TIA1P31483 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.394e-8■□□□□ 9.1
TIA1P31483 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.442e-8■□□□□ 9.1
TIA1P31483 F11R-204ENST00000537746 1245 ntTSL 2 BASIC12.32□□□□□ -0.444e-8■□□□□ 9.1
TIA1P31483 C1GALT1-207ENST00000476068 1186 ntTSL 1 (best)11.09□□□□□ -0.632e-8■□□□□ 9.1
TIA1P31483 C1GALT1-204ENST00000429911 802 ntTSL 510.95□□□□□ -0.662e-8■□□□□ 9.1
TIA1P31483 PARG-201ENST00000402038 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.662e-8■□□□□ 9.1
TIA1P31483 RRP1B-202ENST00000470886 4634 ntTSL 210.17□□□□□ -0.782e-8■□□□□ 9.1
TIA1P31483 EMC3-AS1-201ENST00000326237 2882 ntTSL 29.96□□□□□ -0.812e-8■□□□□ 9.1
TIA1P31483 PARG-206ENST00000614063 3473 ntTSL 29.72□□□□□ -0.852e-8■□□□□ 9.1
TIA1P31483 ACIN1-214ENST00000555352 579 ntTSL 48.85□□□□□ -0.992e-8■□□□□ 9.1
TIA1P31483 EMC3-AS1-206ENST00000440568 558 ntTSL 44.57□□□□□ -1.682e-8■□□□□ 9.1
TIA1P31483 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.522e-11■□□□□ 9.1
TIA1P31483 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC11.23□□□□□ -0.612e-11■□□□□ 9.1
TIA1P31483 MBIP-202ENST00000359527 1449 ntTSL 1 (best) BASIC9.8□□□□□ -0.842e-11■□□□□ 9.1
TIA1P31483 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.12e-11■□□□□ 9.1
TIA1P31483 MBIP-204ENST00000603139 702 ntTSL 54.5□□□□□ -1.692e-11■□□□□ 9.1
TIA1P31483 MBIP-208ENST00000604336 853 ntTSL 54.5□□□□□ -1.692e-11■□□□□ 9.1
TIA1P31483 MBIP-210ENST00000605579 952 ntTSL 24.24□□□□□ -1.732e-11■□□□□ 9.1
TIA1P31483 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.223e-6■□□□□ 9
TIA1P31483 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.69□□□□□ -0.223e-6■□□□□ 9
TIA1P31483 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.013e-6■□□□□ 9
TIA1P31483 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.324e-9■□□□□ 9
TIA1P31483 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.24e-9■□□□□ 9
TIA1P31483 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.154e-9■□□□□ 9
TIA1P31483 ATXN2-218ENST00000549455 568 ntTSL 413.07□□□□□ -0.324e-9■□□□□ 9
TIA1P31483 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.514e-9■□□□□ 9
TIA1P31483 ATXN2-210ENST00000483311 4159 ntTSL 1 (best)11.35□□□□□ -0.594e-9■□□□□ 9
TIA1P31483 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.34e-9■□□□□ 9
TIA1P31483 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.524e-9■□□□□ 9
TIA1P31483 SLTM-212ENST00000557924 3021 ntTSL 210.85□□□□□ -0.672e-6■□□□□ 9
TIA1P31483 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.892e-6■□□□□ 9
TIA1P31483 SLTM-208ENST00000492526 3022 ntTSL 27.22□□□□□ -1.252e-6■□□□□ 9
TIA1P31483 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.94■□□□□ 0.942e-7■□□□□ 9
TIA1P31483 SRRM1-207ENST00000468822 768 ntTSL 213.73□□□□□ -0.214e-6■□□□□ 9
TIA1P31483 SRRM1-223ENST00000600523 575 ntTSL 512.19□□□□□ -0.464e-6■□□□□ 9
TIA1P31483 SRRM1-221ENST00000593639 563 ntTSL 58.07□□□□□ -1.124e-6■□□□□ 9
TIA1P31483 SRRM1-205ENST00000462710 2624 ntTSL 57.98□□□□□ -1.134e-6■□□□□ 9
TIA1P31483 SRRM1-217ENST00000490543 673 ntTSL 57.9□□□□□ -1.144e-6■□□□□ 9
TIA1P31483 SRRM1-211ENST00000478890 480 ntTSL 31.09□□□□□ -2.234e-6■□□□□ 9
TIA1P31483 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.272e-12■□□□□ 9
TIA1P31483 TBL1X-208ENST00000452824 387 ntTSL 510.67□□□□□ -0.73e-6■□□□□ 9
TIA1P31483 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.4□□□□□ -1.542e-8■□□□□ 9
TIA1P31483 ATF7IP2-215ENST00000568027 3406 ntTSL 1 (best)4.82□□□□□ -1.642e-8■□□□□ 9
TIA1P31483 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.742e-8■□□□□ 9
TIA1P31483 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.32□□□□□ -1.883e-6■□□□□ 9
TIA1P31483 YARS-206ENST00000478828 1044 ntTSL 210.06□□□□□ -0.82e-7■□□□□ 9
TIA1P31483 DIAPH1-205ENST00000448451 2102 ntTSL 213.47□□□□□ -0.251e-7■□□□□ 9
TIA1P31483 DIAPH1-208ENST00000476339 2606 ntTSL 210.71□□□□□ -0.691e-7■□□□□ 9
TIA1P31483 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.893e-14■□□□□ 9
TIA1P31483 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.853e-14■□□□□ 9
TIA1P31483 FAM102B-203ENST00000483371 8333 ntTSL 22.35□□□□□ -2.033e-14■□□□□ 9
TIA1P31483 RBMX2-202ENST00000370947 798 ntTSL 2 BASIC10.24□□□□□ -0.775e-6■□□□□ 9
TIA1P31483 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.746e-8■□□□□ 9
TIA1P31483 QSER1-203ENST00000527250 448 ntTSL 32.06□□□□□ -2.086e-8■□□□□ 9
TIA1P31483 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.61e-7■□□□□ 8.9
TIA1P31483 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.31e-7■□□□□ 8.9
TIA1P31483 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.31e-7■□□□□ 8.9
TIA1P31483 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.31e-7■□□□□ 8.9
TIA1P31483 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.861e-7■□□□□ 8.9
TIA1P31483 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.043e-6■□□□□ 8.9
TIA1P31483 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.033e-6■□□□□ 8.9
TIA1P31483 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.76■□□□□ 0.913e-6■□□□□ 8.9
TIA1P31483 TMC6-209ENST00000588087 2384 ntTSL 220.73■□□□□ 0.913e-6■□□□□ 8.9
Retrieved 100 of 17,249 protein–RNA pairs in 277.7 ms