RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 NISCHQ9Y2I1 1504 aa19.8■□□□□ 0.76
RRP1B-202ENST00000470886 DCAF8L2P0C7V8 631 aa17.55■□□□□ 0.4
RRP1B-202ENST00000470886 SUPT5HO00267 1087 aaKnown RBP17.3■□□□□ 0.36
RRP1B-202ENST00000470886 SHROOM4Q9ULL8 1493 aa17.06■□□□□ 0.32
RRP1B-202ENST00000470886 CCDC180Q9P1Z9 1646 aa16.9■□□□□ 0.3
RRP1B-202ENST00000470886 ZCCHC6Q5VYS8 1495 aaKnown RBP16.69■□□□□ 0.26
RRP1B-202ENST00000470886 MYT1Q01538 1121 aa16.52■□□□□ 0.24
RRP1B-202ENST00000470886 ZEB1P37275 1124 aaPredicted RBP16.5■□□□□ 0.23
RRP1B-202ENST00000470886 PCGF6Q9BYE7 350 aa16.46■□□□□ 0.23
RRP1B-202ENST00000470886 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
RRP1B-202ENST00000470886 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
RRP1B-202ENST00000470886 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
RRP1B-202ENST00000470886 APLP2Q06481 763 aa16.21■□□□□ 0.19
RRP1B-202ENST00000470886 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
RRP1B-202ENST00000470886 HRCP23327 699 aa16.18■□□□□ 0.18
RRP1B-202ENST00000470886 EHMT2Q96KQ7 1210 aa16.15■□□□□ 0.18
RRP1B-202ENST00000470886 CENPBP07199 599 aaPredicted RBP16.14■□□□□ 0.17
RRP1B-202ENST00000470886 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
RRP1B-202ENST00000470886 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
RRP1B-202ENST00000470886 CCER1Q8TC90 406 aaPredicted RBP15.99■□□□□ 0.15
RRP1B-202ENST00000470886 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
RRP1B-202ENST00000470886 NACADO15069 1562 aa15.81■□□□□ 0.12
RRP1B-202ENST00000470886 SCRIBQ14160 1630 aa15.79■□□□□ 0.12
RRP1B-202ENST00000470886 UBTFP17480 764 aaKnown RBP15.76■□□□□ 0.11
RRP1B-202ENST00000470886 ABCC9O60706 1549 aa15.74■□□□□ 0.11
RRP1B-202ENST00000470886 TTBK1Q5TCY1 1321 aaPredicted RBP15.72■□□□□ 0.11
RRP1B-202ENST00000470886 LOC105371045A0A1W2PR82 267 aa15.7■□□□□ 0.1
RRP1B-202ENST00000470886 RSF1Q96T23 1441 aaPredicted RBP15.63■□□□□ 0.09
RRP1B-202ENST00000470886 RB1CC1Q8TDY2 1594 aa15.62■□□□□ 0.09
RRP1B-202ENST00000470886 PPARGC1BQ86YN6 1023 aaKnown RBP15.5■□□□□ 0.07
RRP1B-202ENST00000470886 NEFLP07196 543 aa15.48■□□□□ 0.07
RRP1B-202ENST00000470886 RANGAP1P46060 587 aaPredicted RBP15.45■□□□□ 0.06
RRP1B-202ENST00000470886 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
RRP1B-202ENST00000470886 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
RRP1B-202ENST00000470886 YTHDC1Q96MU7 727 aaKnown RBP15.42■□□□□ 0.06
RRP1B-202ENST00000470886 DIEXFQ68CQ4 756 aaKnown RBP15.37■□□□□ 0.05
RRP1B-202ENST00000470886 EEA1Q15075 1411 aa15.34■□□□□ 0.05
RRP1B-202ENST00000470886 ATP1B4Q9UN42 357 aaPredicted RBP15.29■□□□□ 0.04
RRP1B-202ENST00000470886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
RRP1B-202ENST00000470886 HNRNPUL2Q1KMD3 747 aaKnown RBP15.24■□□□□ 0.03
RRP1B-202ENST00000470886 MROH2BQ7Z745 1585 aa15.21■□□□□ 0.03
RRP1B-202ENST00000470886 CECR2Q9BXF3 1484 aa15.2■□□□□ 0.02
RRP1B-202ENST00000470886 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
RRP1B-202ENST00000470886 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
RRP1B-202ENST00000470886 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
RRP1B-202ENST00000470886 ACIN1Q9UKV3 1341 aaKnown RBP15.1■□□□□ 0.01
RRP1B-202ENST00000470886 GOLGA3Q08378 1498 aa15.08■□□□□ 0
RRP1B-202ENST00000470886 TNIKQ9UKE5 1360 aa15.08■□□□□ 0
RRP1B-202ENST00000470886 WIZO95785 1651 aa15.08■□□□□ 0
RRP1B-202ENST00000470886 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
RRP1B-202ENST00000470886 GTF3C3Q9Y5Q9 886 aa15.07■□□□□ 0
RRP1B-202ENST00000470886 CLSPNQ9HAW4 1339 aa15.05■□□□□ 0
RRP1B-202ENST00000470886 ITGAEP38570 1179 aa15.05■□□□□ -0
RRP1B-202ENST00000470886 SMARCA4P51532 1647 aa15.04■□□□□ -0
RRP1B-202ENST00000470886 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
RRP1B-202ENST00000470886 CEP162Q5TB80 1403 aa15□□□□□ -0.01
RRP1B-202ENST00000470886 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
RRP1B-202ENST00000470886 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
RRP1B-202ENST00000470886 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
RRP1B-202ENST00000470886 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
RRP1B-202ENST00000470886 CLIP1P30622 1438 aa14.88□□□□□ -0.03
RRP1B-202ENST00000470886 FAM50AQ14320 339 aaKnown RBP14.85□□□□□ -0.03
RRP1B-202ENST00000470886 ANP32CO43423 234 aa14.83□□□□□ -0.03
RRP1B-202ENST00000470886 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
RRP1B-202ENST00000470886 DAXXQ9UER7 740 aaPredicted RBP14.77□□□□□ -0.04
RRP1B-202ENST00000470886 SOGA1O94964 1423 aa14.76□□□□□ -0.05
RRP1B-202ENST00000470886 KIF27Q86VH2 1401 aa14.74□□□□□ -0.05
RRP1B-202ENST00000470886 NEUROD1Q13562 356 aa14.73□□□□□ -0.05
RRP1B-202ENST00000470886 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
RRP1B-202ENST00000470886 VPS8Q8N3P4 1428 aa14.72□□□□□ -0.05
RRP1B-202ENST00000470886 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
RRP1B-202ENST00000470886 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
RRP1B-202ENST00000470886 POLR3GLQ9BT43 218 aa14.68□□□□□ -0.06
RRP1B-202ENST00000470886 RTL5Q5HYW3 569 aaPredicted RBP14.68□□□□□ -0.06
RRP1B-202ENST00000470886 KIF21BO75037 1637 aa14.67□□□□□ -0.06
RRP1B-202ENST00000470886 TRIM52Q96A61 297 aa14.67□□□□□ -0.06
RRP1B-202ENST00000470886 PEG3Q9GZU2 1588 aa14.65□□□□□ -0.06
RRP1B-202ENST00000470886 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
RRP1B-202ENST00000470886 BCANQ96GW7 911 aa14.59□□□□□ -0.07
RRP1B-202ENST00000470886 TONSLQ96HA7 1378 aa14.55□□□□□ -0.08
RRP1B-202ENST00000470886 ERICH3Q5RHP9 1530 aa14.54□□□□□ -0.08
RRP1B-202ENST00000470886 FHAD1B1AJZ9 1412 aa14.52□□□□□ -0.08
RRP1B-202ENST00000470886 MYT1LQ9UL68 1186 aa14.52□□□□□ -0.08
RRP1B-202ENST00000470886 MIER1Q8N108 512 aa14.51□□□□□ -0.09
RRP1B-202ENST00000470886 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
RRP1B-202ENST00000470886 UNC13AQ9UPW8 1703 aa14.51□□□□□ -0.09
RRP1B-202ENST00000470886 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
RRP1B-202ENST00000470886 BICRAQ9NZM4 1560 aa14.49□□□□□ -0.09
RRP1B-202ENST00000470886 TOP2BQ02880 1626 aa14.47□□□□□ -0.09
RRP1B-202ENST00000470886 FKBP8Q14318 412 aa14.47□□□□□ -0.09
RRP1B-202ENST00000470886 RAPGEF2Q9Y4G8 1499 aa14.46□□□□□ -0.09
RRP1B-202ENST00000470886 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.1
RRP1B-202ENST00000470886 SYNJ1O43426 1573 aa14.45□□□□□ -0.1
RRP1B-202ENST00000470886 CNGB1Q14028 1251 aaPredicted RBP14.43□□□□□ -0.1
RRP1B-202ENST00000470886 CCNB3Q8WWL7 1395 aa14.43□□□□□ -0.1
RRP1B-202ENST00000470886 DDX10Q13206 875 aaKnown RBP14.42□□□□□ -0.1
RRP1B-202ENST00000470886 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
RRP1B-202ENST00000470886 CUX2O14529 1486 aa14.42□□□□□ -0.1
RRP1B-202ENST00000470886 ANP32AP39687 249 aaKnown RBP14.42□□□□□ -0.1
RRP1B-202ENST00000470886 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms