Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXA11P31270 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
HOXA11P31270 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXA11P31270 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 CNN2P2-201ENST00000443536 909 ntBASIC18.11■□□□□ 0.49
HOXA11P31270 CNN2P3-201ENST00000450201 906 ntBASIC18.11■□□□□ 0.49
HOXA11P31270 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXA11P31270 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
HOXA11P31270 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.11■□□□□ 0.49
HOXA11P31270 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
HOXA11P31270 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.11■□□□□ 0.49
HOXA11P31270 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXA11P31270 AL136317.3-201ENST00000618497 906 ntBASIC18.11■□□□□ 0.49
HOXA11P31270 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 TUBB3P1-201ENST00000405796 1332 ntBASIC18.11■□□□□ 0.49
HOXA11P31270 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HOXA11P31270 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
HOXA11P31270 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
HOXA11P31270 AL512652.2-201ENST00000625156 1716 ntBASIC18.11■□□□□ 0.49
HOXA11P31270 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HOXA11P31270 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
HOXA11P31270 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.11■□□□□ 0.49
HOXA11P31270 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HOXA11P31270 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HOXA11P31270 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HOXA11P31270 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXA11P31270 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.1■□□□□ 0.49
HOXA11P31270 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HOXA11P31270 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 AC067863.1-201ENST00000494933 530 ntBASIC18.1■□□□□ 0.49
HOXA11P31270 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.1■□□□□ 0.49
HOXA11P31270 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.1■□□□□ 0.49
HOXA11P31270 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.1■□□□□ 0.49
HOXA11P31270 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HOXA11P31270 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA11P31270 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXA11P31270 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HOXA11P31270 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.1■□□□□ 0.49
HOXA11P31270 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HOXA11P31270 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXA11P31270 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXA11P31270 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXA11P31270 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
HOXA11P31270 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.09■□□□□ 0.49
HOXA11P31270 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA11P31270 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.09■□□□□ 0.49
HOXA11P31270 AC105233.2-201ENST00000523697 349 ntBASIC18.09■□□□□ 0.49
HOXA11P31270 AF228730.5-201ENST00000530288 346 ntBASIC18.09■□□□□ 0.49
HOXA11P31270 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXA11P31270 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXA11P31270 SPCS2P1-201ENST00000561636 679 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms