Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CNGA1P29973 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.16■□□□□ 0.66
CNGA1P29973 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CNGA1P29973 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.16■□□□□ 0.66
CNGA1P29973 GAPDHP21-201ENST00000450301 1010 ntBASIC19.16■□□□□ 0.66
CNGA1P29973 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.16■□□□□ 0.66
CNGA1P29973 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.16■□□□□ 0.66
CNGA1P29973 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.16■□□□□ 0.66
CNGA1P29973 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.16■□□□□ 0.66
CNGA1P29973 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.16■□□□□ 0.66
CNGA1P29973 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.16■□□□□ 0.66
CNGA1P29973 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.16■□□□□ 0.66
CNGA1P29973 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CNGA1P29973 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
CNGA1P29973 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.16■□□□□ 0.66
CNGA1P29973 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.16■□□□□ 0.66
CNGA1P29973 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.16■□□□□ 0.66
CNGA1P29973 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNGA1P29973 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CNGA1P29973 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.16■□□□□ 0.66
CNGA1P29973 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNGA1P29973 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.15■□□□□ 0.66
CNGA1P29973 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CNGA1P29973 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CNGA1P29973 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.15■□□□□ 0.66
CNGA1P29973 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.15■□□□□ 0.66
CNGA1P29973 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.15■□□□□ 0.66
CNGA1P29973 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.15■□□□□ 0.66
CNGA1P29973 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.15■□□□□ 0.66
CNGA1P29973 AC097493.3-201ENST00000509725 367 ntBASIC19.15■□□□□ 0.66
CNGA1P29973 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNGA1P29973 LINC01225-203ENST00000563550 1244 ntBASIC19.15■□□□□ 0.66
CNGA1P29973 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.15■□□□□ 0.66
CNGA1P29973 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.15■□□□□ 0.66
CNGA1P29973 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.15■□□□□ 0.66
CNGA1P29973 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CNGA1P29973 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CNGA1P29973 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CNGA1P29973 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.15■□□□□ 0.66
CNGA1P29973 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CNGA1P29973 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CNGA1P29973 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNGA1P29973 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.14■□□□□ 0.66
CNGA1P29973 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.14■□□□□ 0.66
CNGA1P29973 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.14■□□□□ 0.65
CNGA1P29973 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNGA1P29973 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNGA1P29973 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.14■□□□□ 0.65
CNGA1P29973 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.14■□□□□ 0.65
CNGA1P29973 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CNGA1P29973 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.14■□□□□ 0.65
CNGA1P29973 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.14■□□□□ 0.65
CNGA1P29973 AC005412.3-201ENST00000580309 715 ntBASIC19.14■□□□□ 0.65
CNGA1P29973 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.14■□□□□ 0.65
CNGA1P29973 AL158211.3-201ENST00000607385 239 ntBASIC19.14■□□□□ 0.65
CNGA1P29973 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.14■□□□□ 0.65
CNGA1P29973 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CNGA1P29973 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
CNGA1P29973 AL138688.1-201ENST00000624851 1594 ntBASIC19.14■□□□□ 0.65
CNGA1P29973 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CNGA1P29973 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CNGA1P29973 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.14■□□□□ 0.65
CNGA1P29973 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNGA1P29973 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.14■□□□□ 0.65
CNGA1P29973 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms