Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.75■□□□□ 0.27
GABRB3P28472 SLC22A20-204ENST00000530038 1673 ntBASIC16.75■□□□□ 0.27
GABRB3P28472 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRB3P28472 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.75■□□□□ 0.27
GABRB3P28472 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GABRB3P28472 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
GABRB3P28472 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.74■□□□□ 0.27
GABRB3P28472 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
GABRB3P28472 PCDHA1-201ENST00000378133 2726 ntBASIC16.74■□□□□ 0.27
GABRB3P28472 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
GABRB3P28472 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.74■□□□□ 0.27
GABRB3P28472 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.74■□□□□ 0.27
GABRB3P28472 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.74■□□□□ 0.27
GABRB3P28472 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.74■□□□□ 0.27
GABRB3P28472 KRT18P56-201ENST00000507275 550 ntBASIC16.74■□□□□ 0.27
GABRB3P28472 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 AC107918.2-201ENST00000530817 355 ntBASIC16.74■□□□□ 0.27
GABRB3P28472 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.74■□□□□ 0.27
GABRB3P28472 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.74■□□□□ 0.27
GABRB3P28472 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.74■□□□□ 0.27
GABRB3P28472 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.74■□□□□ 0.27
GABRB3P28472 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.74■□□□□ 0.27
GABRB3P28472 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.74■□□□□ 0.27
GABRB3P28472 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GABRB3P28472 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.74■□□□□ 0.27
GABRB3P28472 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.74■□□□□ 0.27
GABRB3P28472 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
GABRB3P28472 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRB3P28472 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
GABRB3P28472 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.73■□□□□ 0.27
GABRB3P28472 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
GABRB3P28472 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRB3P28472 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GABRB3P28472 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GABRB3P28472 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.73■□□□□ 0.27
GABRB3P28472 PMS2P1-201ENST00000431037 1228 ntBASIC16.73■□□□□ 0.27
GABRB3P28472 HNRNPDP1-201ENST00000439535 754 ntBASIC16.73■□□□□ 0.27
GABRB3P28472 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.73■□□□□ 0.27
GABRB3P28472 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.73■□□□□ 0.27
GABRB3P28472 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRB3P28472 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
GABRB3P28472 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.73■□□□□ 0.27
GABRB3P28472 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
GABRB3P28472 TP73-AS1-207ENST00000624167 988 ntBASIC16.73■□□□□ 0.27
GABRB3P28472 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GABRB3P28472 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GABRB3P28472 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRB3P28472 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
GABRB3P28472 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.73■□□□□ 0.27
GABRB3P28472 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GABRB3P28472 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRB3P28472 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.72■□□□□ 0.27
GABRB3P28472 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GABRB3P28472 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
GABRB3P28472 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GABRB3P28472 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRB3P28472 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRB3P28472 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
GABRB3P28472 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.72■□□□□ 0.27
GABRB3P28472 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRB3P28472 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
GABRB3P28472 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GABRB3P28472 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms