Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
APCP25054 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 NUS1P3-201ENST00000423502 862 ntBASIC13.93□□□□□ -0.18
APCP25054 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.93□□□□□ -0.18
APCP25054 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APCP25054 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.93□□□□□ -0.18
APCP25054 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.93□□□□□ -0.18
APCP25054 KRT8P22-201ENST00000562317 1415 ntBASIC13.93□□□□□ -0.18
APCP25054 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.93□□□□□ -0.18
APCP25054 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.93□□□□□ -0.18
APCP25054 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.93□□□□□ -0.18
APCP25054 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.93□□□□□ -0.18
APCP25054 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.93□□□□□ -0.18
APCP25054 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
APCP25054 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
APCP25054 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
APCP25054 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
APCP25054 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.92□□□□□ -0.18
APCP25054 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.92□□□□□ -0.18
APCP25054 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APCP25054 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.92□□□□□ -0.18
APCP25054 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 EGFEM1P-202ENST00000431685 1563 ntBASIC13.92□□□□□ -0.18
APCP25054 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.92□□□□□ -0.18
APCP25054 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.92□□□□□ -0.18
APCP25054 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.92□□□□□ -0.18
APCP25054 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.92□□□□□ -0.18
APCP25054 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
APCP25054 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.92□□□□□ -0.18
APCP25054 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.92□□□□□ -0.18
APCP25054 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.92□□□□□ -0.18
APCP25054 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 KRT8P19-201ENST00000551916 1455 ntBASIC13.92□□□□□ -0.18
APCP25054 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
APCP25054 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.92□□□□□ -0.18
APCP25054 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.92□□□□□ -0.18
APCP25054 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APCP25054 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.92□□□□□ -0.18
APCP25054 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
APCP25054 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.91□□□□□ -0.18
APCP25054 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.91□□□□□ -0.18
APCP25054 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.91□□□□□ -0.18
APCP25054 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.91□□□□□ -0.18
APCP25054 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.91□□□□□ -0.18
APCP25054 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APCP25054 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APCP25054 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.91□□□□□ -0.18
APCP25054 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APCP25054 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APCP25054 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APCP25054 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.91□□□□□ -0.18
APCP25054 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APCP25054 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APCP25054 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.91□□□□□ -0.18
APCP25054 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APCP25054 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.91□□□□□ -0.18
APCP25054 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC13.91□□□□□ -0.18
APCP25054 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.91□□□□□ -0.18
APCP25054 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.91□□□□□ -0.18
APCP25054 AL671710.1-201ENST00000610245 2349 ntBASIC13.91□□□□□ -0.18
APCP25054 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms