Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
COL5A2P05997 VMO1-203ENST00000416307 712 ntTSL 2 BASIC21.84■■□□□ 1.09
COL5A2P05997 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
COL5A2P05997 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.84■■□□□ 1.09
COL5A2P05997 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.84■■□□□ 1.09
COL5A2P05997 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.84■■□□□ 1.09
COL5A2P05997 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.84■■□□□ 1.09
COL5A2P05997 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC21.84■■□□□ 1.09
COL5A2P05997 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
COL5A2P05997 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL5A2P05997 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
COL5A2P05997 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
COL5A2P05997 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL5A2P05997 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC21.83■■□□□ 1.09
COL5A2P05997 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL5A2P05997 AC007389.4-201ENST00000454674 793 ntBASIC21.83■■□□□ 1.09
COL5A2P05997 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.83■■□□□ 1.09
COL5A2P05997 AP005482.1-201ENST00000563722 1273 ntBASIC21.83■■□□□ 1.09
COL5A2P05997 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC21.83■■□□□ 1.09
COL5A2P05997 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.83■■□□□ 1.09
COL5A2P05997 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL5A2P05997 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.83■■□□□ 1.09
COL5A2P05997 REXO1L6P-201ENST00000603433 1515 ntBASIC21.83■■□□□ 1.09
COL5A2P05997 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC21.83■■□□□ 1.09
COL5A2P05997 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
COL5A2P05997 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
COL5A2P05997 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
COL5A2P05997 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL5A2P05997 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC21.83■■□□□ 1.09
COL5A2P05997 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.83■■□□□ 1.09
COL5A2P05997 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
COL5A2P05997 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL5A2P05997 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL5A2P05997 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL5A2P05997 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
COL5A2P05997 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.83■■□□□ 1.08
COL5A2P05997 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC21.83■■□□□ 1.08
COL5A2P05997 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.83■■□□□ 1.08
COL5A2P05997 AC092552.1-201ENST00000547243 906 ntBASIC21.83■■□□□ 1.08
COL5A2P05997 MIR6775-201ENST00000617557 69 ntBASIC21.83■■□□□ 1.08
COL5A2P05997 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC21.83■■□□□ 1.08
COL5A2P05997 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC21.83■■□□□ 1.08
COL5A2P05997 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL5A2P05997 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
COL5A2P05997 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC21.83■■□□□ 1.08
COL5A2P05997 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL5A2P05997 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A2P05997 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.82■■□□□ 1.08
COL5A2P05997 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A2P05997 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A2P05997 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.82■■□□□ 1.08
COL5A2P05997 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A2P05997 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.82■■□□□ 1.08
COL5A2P05997 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
COL5A2P05997 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A2P05997 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A2P05997 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.82■■□□□ 1.08
COL5A2P05997 KRT8P39-201ENST00000396270 1433 ntBASIC21.82■■□□□ 1.08
COL5A2P05997 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC21.82■■□□□ 1.08
COL5A2P05997 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
COL5A2P05997 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.82■■□□□ 1.08
COL5A2P05997 MEP1AP4-201ENST00000423244 1087 ntBASIC21.82■■□□□ 1.08
COL5A2P05997 AC245100.3-201ENST00000441281 285 ntBASIC21.82■■□□□ 1.08
COL5A2P05997 SDHAP3-202ENST00000515467 728 ntBASIC21.82■■□□□ 1.08
COL5A2P05997 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC21.82■■□□□ 1.08
COL5A2P05997 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.82■■□□□ 1.08
COL5A2P05997 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC21.82■■□□□ 1.08
COL5A2P05997 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC21.82■■□□□ 1.08
COL5A2P05997 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC21.82■■□□□ 1.08
COL5A2P05997 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.82■■□□□ 1.08
COL5A2P05997 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A2P05997 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL5A2P05997 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.82■■□□□ 1.08
COL5A2P05997 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A2P05997 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.81■■□□□ 1.08
COL5A2P05997 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A2P05997 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A2P05997 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.81■■□□□ 1.08
COL5A2P05997 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
COL5A2P05997 LINC02012-201ENST00000608206 1725 ntBASIC21.81■■□□□ 1.08
COL5A2P05997 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.81■■□□□ 1.08
COL5A2P05997 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A2P05997 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A2P05997 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21.81■■□□□ 1.08
COL5A2P05997 RAD18-204ENST00000418463 563 ntTSL 4 BASIC21.81■■□□□ 1.08
COL5A2P05997 RAD18-205ENST00000421052 582 ntTSL 3 BASIC21.81■■□□□ 1.08
COL5A2P05997 USP32P1-208ENST00000506594 1164 ntBASIC21.81■■□□□ 1.08
COL5A2P05997 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL5A2P05997 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.81■■□□□ 1.08
COL5A2P05997 SNX12-206ENST00000622259 661 ntTSL 5 BASIC21.81■■□□□ 1.08
COL5A2P05997 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms