Protein–RNA interactions for Protein: O00507

USP9Y, Probable ubiquitin carboxyl-terminal hydrolase FAF-Y, humanhuman

Predicted RBP Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YO00507 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.38□□□□□ -0.11
USP9YO00507 HNRNPUP1-201ENST00000554987 333 ntBASIC14.38□□□□□ -0.11
USP9YO00507 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.38□□□□□ -0.11
USP9YO00507 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.38□□□□□ -0.11
USP9YO00507 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
USP9YO00507 AC131009.4-201ENST00000624048 1740 ntBASIC14.38□□□□□ -0.11
USP9YO00507 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.38□□□□□ -0.11
USP9YO00507 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.38□□□□□ -0.11
USP9YO00507 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
USP9YO00507 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.38□□□□□ -0.11
USP9YO00507 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
USP9YO00507 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
USP9YO00507 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
USP9YO00507 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.38□□□□□ -0.11
USP9YO00507 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.38□□□□□ -0.11
USP9YO00507 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.38□□□□□ -0.11
USP9YO00507 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.38□□□□□ -0.11
USP9YO00507 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.38□□□□□ -0.11
USP9YO00507 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
USP9YO00507 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.38□□□□□ -0.11
USP9YO00507 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.38□□□□□ -0.11
USP9YO00507 AC135776.1-201ENST00000319817 2481 ntBASIC14.38□□□□□ -0.11
USP9YO00507 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
USP9YO00507 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
USP9YO00507 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9YO00507 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9YO00507 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.37□□□□□ -0.11
USP9YO00507 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 AL022328.1-201ENST00000610050 478 ntBASIC14.37□□□□□ -0.11
USP9YO00507 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
USP9YO00507 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
USP9YO00507 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9YO00507 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.37□□□□□ -0.11
USP9YO00507 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.37□□□□□ -0.11
USP9YO00507 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.37□□□□□ -0.11
USP9YO00507 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9YO00507 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9YO00507 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
USP9YO00507 ACTG1P17-201ENST00000558391 1119 ntBASIC14.37□□□□□ -0.11
USP9YO00507 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
USP9YO00507 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9YO00507 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.37□□□□□ -0.11
USP9YO00507 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9YO00507 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.37□□□□□ -0.11
USP9YO00507 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
USP9YO00507 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
USP9YO00507 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.36□□□□□ -0.11
USP9YO00507 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.36□□□□□ -0.11
USP9YO00507 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9YO00507 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.36□□□□□ -0.11
USP9YO00507 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
USP9YO00507 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
USP9YO00507 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
USP9YO00507 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9YO00507 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.36□□□□□ -0.11
USP9YO00507 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
USP9YO00507 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9YO00507 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
USP9YO00507 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms