Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 CROCCP1-201ENST00000426910 5675 ntBASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 FAM58DP-201ENST00000428076 619 ntBASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 AC092364.2-202ENST00000597012 1073 ntBASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 Z92544.3-201ENST00000624747 417 ntBASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TBC1D3FA6NER0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 RBPMS2P1-201ENST00000437762 623 ntBASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TBC1D3FA6NER0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 LINC02012-201ENST00000608206 1725 ntBASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 KRT8P23-201ENST00000560090 1207 ntBASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 CYP2A7P1-201ENST00000595391 815 ntBASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TBC1D3FA6NER0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms