Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 AL603756.1-201ENST00000606511 2163 ntBASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CCDC162PA2VCL2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 MRPL3P1-201ENST00000400109 1033 ntBASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 REXO1L3P-201ENST00000622202 1288 ntBASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC162PA2VCL2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 TOP3BP1-201ENST00000420768 1380 ntBASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 RPS2P28-201ENST00000314255 741 ntBASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 AC008667.4-201ENST00000607370 168 ntBASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 AL773604.1-201ENST00000617417 272 ntBASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC162PA2VCL2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC162PA2VCL2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC162PA2VCL2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC162PA2VCL2 UBALD1-205ENST00000590891 2641 ntBASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 LINC00895-201ENST00000629028 1637 ntBASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 AL118508.1-201ENST00000613502 2345 ntBASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 AL031284.1-201ENST00000419297 478 ntBASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC162PA2VCL2 MIR7706-201ENST00000613747 67 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms