Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC24.7■■□□□ 1.55
HFM1A2PYH4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC24.7■■□□□ 1.55
HFM1A2PYH4 AC026150.2-201ENST00000564693 1156 ntBASIC24.7■■□□□ 1.55
HFM1A2PYH4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC24.7■■□□□ 1.55
HFM1A2PYH4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC24.7■■□□□ 1.55
HFM1A2PYH4 Z92544.3-201ENST00000624747 417 ntBASIC24.7■■□□□ 1.55
HFM1A2PYH4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
HFM1A2PYH4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
HFM1A2PYH4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
HFM1A2PYH4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC24.7■■□□□ 1.54
HFM1A2PYH4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
HFM1A2PYH4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC24.7■■□□□ 1.54
HFM1A2PYH4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC24.7■■□□□ 1.54
HFM1A2PYH4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
HFM1A2PYH4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 IGHV3-62-201ENST00000520057 340 ntBASIC24.69■■□□□ 1.54
HFM1A2PYH4 ALG1L8P-201ENST00000533887 760 ntBASIC24.69■■□□□ 1.54
HFM1A2PYH4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 UXT-AS1-201ENST00000590504 1525 ntBASIC24.69■■□□□ 1.54
HFM1A2PYH4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HFM1A2PYH4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC24.69■■□□□ 1.54
HFM1A2PYH4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC24.68■■□□□ 1.54
HFM1A2PYH4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC24.68■■□□□ 1.54
HFM1A2PYH4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
HFM1A2PYH4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC24.68■■□□□ 1.54
HFM1A2PYH4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
HFM1A2PYH4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC24.68■■□□□ 1.54
HFM1A2PYH4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HFM1A2PYH4 RBPMS2P1-201ENST00000437762 623 ntBASIC24.68■■□□□ 1.54
HFM1A2PYH4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC24.68■■□□□ 1.54
HFM1A2PYH4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC24.68■■□□□ 1.54
HFM1A2PYH4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HFM1A2PYH4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HFM1A2PYH4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
HFM1A2PYH4 AC026471.1-201ENST00000564629 3026 ntBASIC24.67■■□□□ 1.54
HFM1A2PYH4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HFM1A2PYH4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
HFM1A2PYH4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HFM1A2PYH4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
HFM1A2PYH4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HFM1A2PYH4 FAM220BP-201ENST00000377689 816 ntBASIC24.67■■□□□ 1.54
HFM1A2PYH4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HFM1A2PYH4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC24.67■■□□□ 1.54
HFM1A2PYH4 AC020765.3-201ENST00000613051 740 ntBASIC24.67■■□□□ 1.54
HFM1A2PYH4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC24.67■■□□□ 1.54
HFM1A2PYH4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HFM1A2PYH4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC24.67■■□□□ 1.54
HFM1A2PYH4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
HFM1A2PYH4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC24.67■■□□□ 1.54
HFM1A2PYH4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC24.66■■□□□ 1.54
HFM1A2PYH4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC24.66■■□□□ 1.54
HFM1A2PYH4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HFM1A2PYH4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC24.66■■□□□ 1.54
HFM1A2PYH4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms