Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PRSS29P-201ENST00000440800 595 ntBASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 RNA5SP416-201ENST00000516838 111 ntBASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC010654.1-201ENST00000615722 808 ntBASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC139530.3-201ENST00000620344 690 ntBASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PKD1P5-201ENST00000532415 10291 ntBASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC040169.1-201ENST00000565382 521 ntBASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 OR7E47P-204ENST00000575924 449 ntBASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC064836.3-201ENST00000607928 673 ntBASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 AC107918.2-201ENST00000530817 355 ntBASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 MIR4751-201ENST00000578027 74 ntBASIC15.35■□□□□ 0.05
TNFSF12-TNFSF13A0A0A6YY99 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms