Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 LINC00167-201ENST00000530583 1419 ntBASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HCC1Q9Y3T6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 PKD1P5-201ENST00000532415 10291 ntBASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HCC1Q9Y3T6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
R3HCC1Q9Y3T6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.39■□□□□ 0.7
R3HCC1Q9Y3T6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
R3HCC1Q9Y3T6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
R3HCC1Q9Y3T6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 DRAXINP1-201ENST00000437611 948 ntBASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 MTCL1P1-201ENST00000446207 792 ntBASIC19.39■□□□□ 0.69
R3HCC1Q9Y3T6 TOB2P1-201ENST00000469761 992 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms