Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 AC068472.1-201ENST00000474589 881 ntBASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 TUBB8P12-201ENST00000308911 1335 ntBASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 TUBB7P-202ENST00000428444 1305 ntBASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 TUBB8P7-204ENST00000567960 1332 ntBASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RCL1Q9Y2P8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 CD99P1-205ENST00000527459 561 ntBASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 FAM87A-204ENST00000613235 858 ntBASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
RCL1Q9Y2P8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms