Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 AC105339.1-204ENST00000636249 355 ntBASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HDAC6Q9UBN7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 AC008894.3-201ENST00000624324 3103 ntBASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 AL121761.2-201ENST00000598007 1648 ntBASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
HDAC6Q9UBN7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 AC087163.2-201ENST00000457299 853 ntBASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDAC6Q9UBN7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 AC004835.2-201ENST00000603762 682 ntBASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 REXO1L3P-201ENST00000622202 1288 ntBASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDAC6Q9UBN7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDAC6Q9UBN7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms