Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
COL21A1Q96P44 AL022326.1-202ENST00000641533 845 ntBASIC16.02■□□□□ 0.16
COL21A1Q96P44 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.02■□□□□ 0.16
COL21A1Q96P44 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL21A1Q96P44 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL21A1Q96P44 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL21A1Q96P44 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COL21A1Q96P44 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.02■□□□□ 0.15
COL21A1Q96P44 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 AC079328.2-201ENST00000561241 3354 ntBASIC16.01■□□□□ 0.15
COL21A1Q96P44 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 AC079781.3-201ENST00000449110 356 ntBASIC16.01■□□□□ 0.15
COL21A1Q96P44 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COL21A1Q96P44 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COL21A1Q96P44 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16■□□□□ 0.15
COL21A1Q96P44 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16■□□□□ 0.15
COL21A1Q96P44 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
COL21A1Q96P44 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16■□□□□ 0.15
COL21A1Q96P44 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
COL21A1Q96P44 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16■□□□□ 0.15
COL21A1Q96P44 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16■□□□□ 0.15
COL21A1Q96P44 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16■□□□□ 0.15
COL21A1Q96P44 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16■□□□□ 0.15
COL21A1Q96P44 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
COL21A1Q96P44 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16■□□□□ 0.15
COL21A1Q96P44 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16■□□□□ 0.15
COL21A1Q96P44 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16■□□□□ 0.15
COL21A1Q96P44 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16■□□□□ 0.15
COL21A1Q96P44 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16■□□□□ 0.15
COL21A1Q96P44 AL031008.1-201ENST00000619963 541 ntBASIC16■□□□□ 0.15
COL21A1Q96P44 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16■□□□□ 0.15
COL21A1Q96P44 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16■□□□□ 0.15
COL21A1Q96P44 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16■□□□□ 0.15
COL21A1Q96P44 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COL21A1Q96P44 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
COL21A1Q96P44 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
COL21A1Q96P44 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms