Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ERCC4Q92889 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC4Q92889 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ERCC4Q92889 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC4Q92889 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC4Q92889 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC4Q92889 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC4Q92889 DRAXINP1-201ENST00000437611 948 ntBASIC19.21■□□□□ 0.67
ERCC4Q92889 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.21■□□□□ 0.67
ERCC4Q92889 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ERCC4Q92889 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC4Q92889 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC4Q92889 MIR3180-1-201ENST00000580374 94 ntBASIC19.21■□□□□ 0.67
ERCC4Q92889 MIR3180-3-201ENST00000584616 94 ntBASIC19.21■□□□□ 0.67
ERCC4Q92889 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ERCC4Q92889 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC4Q92889 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ERCC4Q92889 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
ERCC4Q92889 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.21■□□□□ 0.67
ERCC4Q92889 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ERCC4Q92889 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.21■□□□□ 0.67
ERCC4Q92889 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ERCC4Q92889 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.2■□□□□ 0.66
ERCC4Q92889 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.2■□□□□ 0.66
ERCC4Q92889 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.2■□□□□ 0.66
ERCC4Q92889 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.2■□□□□ 0.66
ERCC4Q92889 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ERCC4Q92889 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.2■□□□□ 0.66
ERCC4Q92889 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.2■□□□□ 0.66
ERCC4Q92889 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.2■□□□□ 0.66
ERCC4Q92889 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.2■□□□□ 0.66
ERCC4Q92889 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.2■□□□□ 0.66
ERCC4Q92889 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ERCC4Q92889 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
ERCC4Q92889 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ERCC4Q92889 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ERCC4Q92889 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ERCC4Q92889 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
ERCC4Q92889 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.19■□□□□ 0.66
ERCC4Q92889 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC4Q92889 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC4Q92889 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.19■□□□□ 0.66
ERCC4Q92889 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ERCC4Q92889 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ERCC4Q92889 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC4Q92889 KRT18P35-201ENST00000510488 1269 ntBASIC19.19■□□□□ 0.66
ERCC4Q92889 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC4Q92889 DUX4L17-201ENST00000557360 1267 ntBASIC19.19■□□□□ 0.66
ERCC4Q92889 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.19■□□□□ 0.66
ERCC4Q92889 AC074051.2-201ENST00000565115 352 ntBASIC19.19■□□□□ 0.66
ERCC4Q92889 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.19■□□□□ 0.66
ERCC4Q92889 Z69720.1-201ENST00000601483 472 ntBASIC19.19■□□□□ 0.66
ERCC4Q92889 AL445228.2-201ENST00000605589 952 ntBASIC19.19■□□□□ 0.66
ERCC4Q92889 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms