Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
DDX1Q92499 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.96■□□□□ 0.47
DDX1Q92499 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.96■□□□□ 0.47
DDX1Q92499 SLC22A20-204ENST00000530038 1673 ntBASIC17.96■□□□□ 0.47
DDX1Q92499 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
DDX1Q92499 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.96■□□□□ 0.47
DDX1Q92499 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.96■□□□□ 0.47
DDX1Q92499 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 HLA-J-202ENST00000469281 1241 ntBASIC17.96■□□□□ 0.47
DDX1Q92499 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.96■□□□□ 0.47
DDX1Q92499 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.96■□□□□ 0.47
DDX1Q92499 OR7E47P-204ENST00000575924 449 ntBASIC17.96■□□□□ 0.47
DDX1Q92499 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.96■□□□□ 0.47
DDX1Q92499 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 AC239800.4-201ENST00000603712 296 ntBASIC17.96■□□□□ 0.47
DDX1Q92499 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
DDX1Q92499 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
DDX1Q92499 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
DDX1Q92499 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
DDX1Q92499 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DDX1Q92499 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
DDX1Q92499 KRT18P28-201ENST00000453838 1332 ntBASIC17.96■□□□□ 0.46
DDX1Q92499 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
DDX1Q92499 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.95■□□□□ 0.46
DDX1Q92499 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
DDX1Q92499 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.95■□□□□ 0.46
DDX1Q92499 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
DDX1Q92499 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.95■□□□□ 0.46
DDX1Q92499 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
DDX1Q92499 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.95■□□□□ 0.46
DDX1Q92499 AC004832.2-201ENST00000426397 482 ntBASIC17.95■□□□□ 0.46
DDX1Q92499 DNAJB3-202ENST00000449667 1266 ntBASIC17.95■□□□□ 0.46
DDX1Q92499 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
DDX1Q92499 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.95■□□□□ 0.46
DDX1Q92499 AC002347.1-201ENST00000569543 541 ntBASIC17.95■□□□□ 0.46
DDX1Q92499 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.95■□□□□ 0.46
DDX1Q92499 GGTLC5P-201ENST00000617623 998 ntBASIC17.95■□□□□ 0.46
DDX1Q92499 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
DDX1Q92499 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DDX1Q92499 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX1Q92499 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
DDX1Q92499 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
DDX1Q92499 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX1Q92499 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX1Q92499 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX1Q92499 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX1Q92499 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
DDX1Q92499 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX1Q92499 RNA5SP416-201ENST00000516838 111 ntBASIC17.94■□□□□ 0.46
DDX1Q92499 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX1Q92499 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX1Q92499 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
DDX1Q92499 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.94■□□□□ 0.46
DDX1Q92499 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.94■□□□□ 0.46
DDX1Q92499 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DDX1Q92499 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.94■□□□□ 0.46
DDX1Q92499 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms