Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 AC004706.3-202ENST00000621574 984 ntBASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 AC005593.1-201ENST00000624894 515 ntBASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NEIL3Q8TAT5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 AC073621.1-201ENST00000392730 636 ntBASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 UNC93B6-202ENST00000528242 690 ntBASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 AC034105.1-201ENST00000563488 319 ntBASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 AC023511.2-201ENST00000618803 211 ntBASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NEIL3Q8TAT5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 POLD2P1-201ENST00000511220 997 ntBASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 TERC-201ENST00000602385 541 ntBASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 AC027601.4-201ENST00000611259 610 ntBASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NEIL3Q8TAT5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms