Protein–RNA interactions for Protein: Q8N8W4

PNPLA1, Patatin-like phospholipase domain-containing protein 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA1Q8N8W4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 SPCS2P1-201ENST00000561636 679 ntBASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PNPLA1Q8N8W4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 AC027612.4-201ENST00000605371 583 ntBASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 PCDHB17P-201ENST00000539533 2393 ntBASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 AC078925.2-201ENST00000624013 1973 ntBASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 PCDH8P1-201ENST00000428983 2773 ntBASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 AC006504.4-201ENST00000592118 1568 ntBASIC17.11■□□□□ 0.33
PNPLA1Q8N8W4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 VN2R19P-201ENST00000442399 1052 ntBASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 AC108073.2-201ENST00000464002 357 ntBASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.1■□□□□ 0.33
PNPLA1Q8N8W4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms