Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 PRYP6-201ENST00000514804 343 ntBASIC11.59□□□□□ -0.55
CSMD3Q7Z407 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 AC120498.9-201ENST00000339021 3867 ntBASIC11.59□□□□□ -0.55
CSMD3Q7Z407 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 AC091167.2-201ENST00000579581 588 ntBASIC11.59□□□□□ -0.55
CSMD3Q7Z407 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.59□□□□□ -0.55
CSMD3Q7Z407 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CSMD3Q7Z407 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 TUBB1P2-201ENST00000422712 1306 ntBASIC11.58□□□□□ -0.56
CSMD3Q7Z407 TUBB1P1-201ENST00000503144 1300 ntBASIC11.58□□□□□ -0.56
CSMD3Q7Z407 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 CROCCP4-201ENST00000457096 498 ntBASIC11.58□□□□□ -0.56
CSMD3Q7Z407 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 AC020907.1-201ENST00000616460 1350 ntBASIC11.58□□□□□ -0.56
CSMD3Q7Z407 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 KRT223P-202ENST00000449164 1292 ntBASIC11.58□□□□□ -0.56
CSMD3Q7Z407 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.58□□□□□ -0.56
CSMD3Q7Z407 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CSMD3Q7Z407 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 TPI1-206ENST00000488464 791 ntTSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 AC003101.2-201ENST00000612557 442 ntBASIC11.57□□□□□ -0.56
CSMD3Q7Z407 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CSMD3Q7Z407 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms