Protein–RNA interactions for Protein: Q52LA3

LIN52, Protein lin-52 homolog, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52Q52LA3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 AC002558.1-201ENST00000488906 803 ntBASIC16.26■□□□□ 0.19
LIN52Q52LA3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LIN52Q52LA3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
LIN52Q52LA3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 AL136038.3-201ENST00000561909 1096 ntBASIC16.25■□□□□ 0.19
LIN52Q52LA3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 AC011498.5-201ENST00000592027 486 ntBASIC16.25■□□□□ 0.19
LIN52Q52LA3 AL592071.1-201ENST00000611956 408 ntBASIC16.25■□□□□ 0.19
LIN52Q52LA3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 TNRC18P2-201ENST00000417666 2714 ntBASIC16.25■□□□□ 0.19
LIN52Q52LA3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN52Q52LA3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LIN52Q52LA3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 COX5BP2-201ENST00000392354 334 ntBASIC16.24■□□□□ 0.19
LIN52Q52LA3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 AC090616.6-201ENST00000582640 721 ntBASIC16.24■□□□□ 0.19
LIN52Q52LA3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.24■□□□□ 0.19
LIN52Q52LA3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN52Q52LA3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms