Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
ANKRD55Q3KP44 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ANKRD55Q3KP44 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ANKRD55Q3KP44 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ANKRD55Q3KP44 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AL135999.2-201ENST00000622438 1686 ntBASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 IGHGP-201ENST00000390555 1178 ntBASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 RCN1P1-201ENST00000400413 996 ntBASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 RASA4DP-201ENST00000460726 1199 ntBASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 COX11P1-201ENST00000489116 835 ntBASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AC141257.4-201ENST00000634557 245 ntBASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AC136944.6-201ENST00000634818 245 ntBASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 AL353692.3-201ENST00000407031 1396 ntBASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
ANKRD55Q3KP44 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ANKRD55Q3KP44 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
ANKRD55Q3KP44 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
ANKRD55Q3KP44 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.06□□□□□ -0.16
ANKRD55Q3KP44 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
ANKRD55Q3KP44 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ANKRD55Q3KP44 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.06□□□□□ -0.16
ANKRD55Q3KP44 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
ANKRD55Q3KP44 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms