Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC11.22□□□□□ -0.61
SYCNQ0VAF6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SYCNQ0VAF6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SYCNQ0VAF6 MST1L-201ENST00000442552 2185 ntBASIC11.21□□□□□ -0.61
SYCNQ0VAF6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 NCF1C-201ENST00000438382 1427 ntBASIC11.21□□□□□ -0.61
SYCNQ0VAF6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 PRYP5-201ENST00000451909 266 ntBASIC11.21□□□□□ -0.61
SYCNQ0VAF6 BX005266.1-201ENST00000473402 457 ntBASIC11.21□□□□□ -0.61
SYCNQ0VAF6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.21□□□□□ -0.61
SYCNQ0VAF6 AP001269.4-201ENST00000609611 512 ntBASIC11.21□□□□□ -0.61
SYCNQ0VAF6 AL732292.2-201ENST00000609649 430 ntBASIC11.21□□□□□ -0.61
SYCNQ0VAF6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.21□□□□□ -0.61
SYCNQ0VAF6 AL139288.1-201ENST00000623748 933 ntBASIC11.21□□□□□ -0.61
SYCNQ0VAF6 AL022326.1-202ENST00000641533 845 ntBASIC11.21□□□□□ -0.61
SYCNQ0VAF6 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
SYCNQ0VAF6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 AC004817.3-201ENST00000602957 2129 ntBASIC11.2□□□□□ -0.62
SYCNQ0VAF6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 AC106795.1-205ENST00000512851 1056 ntBASIC11.2□□□□□ -0.62
SYCNQ0VAF6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 AC091304.2-201ENST00000564639 760 ntBASIC11.2□□□□□ -0.62
SYCNQ0VAF6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
SYCNQ0VAF6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms