Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SRPXP78539 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.97□□□□□ -0.17
SRPXP78539 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.97□□□□□ -0.17
SRPXP78539 STARP1-201ENST00000397973 869 ntBASIC13.97□□□□□ -0.17
SRPXP78539 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.97□□□□□ -0.17
SRPXP78539 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 AC008550.1-201ENST00000511500 884 ntBASIC13.97□□□□□ -0.17
SRPXP78539 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SRPXP78539 AL023973.1-201ENST00000624619 620 ntBASIC13.97□□□□□ -0.17
SRPXP78539 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.97□□□□□ -0.17
SRPXP78539 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.97□□□□□ -0.17
SRPXP78539 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SRPXP78539 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.97□□□□□ -0.17
SRPXP78539 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SRPXP78539 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.97□□□□□ -0.17
SRPXP78539 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.97□□□□□ -0.17
SRPXP78539 KRT8P10-201ENST00000450021 1447 ntBASIC13.97□□□□□ -0.17
SRPXP78539 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SRPXP78539 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SRPXP78539 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRPXP78539 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.97□□□□□ -0.17
SRPXP78539 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SRPXP78539 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.96□□□□□ -0.17
SRPXP78539 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SRPXP78539 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 KRT18P22-201ENST00000402024 1347 ntBASIC13.96□□□□□ -0.17
SRPXP78539 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.96□□□□□ -0.17
SRPXP78539 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.96□□□□□ -0.17
SRPXP78539 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.96□□□□□ -0.17
SRPXP78539 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.96□□□□□ -0.17
SRPXP78539 AL353593.2-201ENST00000602529 1483 ntBASIC13.96□□□□□ -0.17
SRPXP78539 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.96□□□□□ -0.17
SRPXP78539 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.96□□□□□ -0.17
SRPXP78539 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.96□□□□□ -0.17
SRPXP78539 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.96□□□□□ -0.17
SRPXP78539 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.96□□□□□ -0.17
SRPXP78539 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SRPXP78539 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.96□□□□□ -0.17
SRPXP78539 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.96□□□□□ -0.17
SRPXP78539 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
SRPXP78539 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRPXP78539 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SRPXP78539 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
SRPXP78539 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SRPXP78539 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SRPXP78539 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SRPXP78539 AC002310.6-201ENST00000624451 1377 ntBASIC13.96□□□□□ -0.18
SRPXP78539 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SRPXP78539 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.96□□□□□ -0.18
SRPXP78539 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SRPXP78539 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SRPXP78539 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.95□□□□□ -0.18
SRPXP78539 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 TSPY20P-201ENST00000450910 630 ntBASIC13.95□□□□□ -0.18
SRPXP78539 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 AL359075.1-203ENST00000462729 1002 ntBASIC13.95□□□□□ -0.18
SRPXP78539 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SRPXP78539 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.95□□□□□ -0.18
SRPXP78539 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms